Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
NPAS2Q99743 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.69□□□□□ -0.06
NPAS2Q99743 RPL13P2-201ENST00000440687 659 ntBASIC14.69□□□□□ -0.06
NPAS2Q99743 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AC055876.2-201ENST00000531834 546 ntBASIC14.69□□□□□ -0.06
NPAS2Q99743 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.69□□□□□ -0.06
NPAS2Q99743 CR383656.12-201ENST00000549567 513 ntBASIC14.69□□□□□ -0.06
NPAS2Q99743 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.69□□□□□ -0.06
NPAS2Q99743 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AC007431.3-201ENST00000623221 587 ntBASIC14.69□□□□□ -0.06
NPAS2Q99743 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AL358472.5-202ENST00000641448 1267 ntBASIC14.69□□□□□ -0.06
NPAS2Q99743 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.69□□□□□ -0.06
NPAS2Q99743 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPAS2Q99743 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 CICP17-201ENST00000418553 2377 ntBASIC14.69□□□□□ -0.06
NPAS2Q99743 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS2Q99743 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.69□□□□□ -0.06
NPAS2Q99743 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NPAS2Q99743 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPAS2Q99743 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.68□□□□□ -0.06
NPAS2Q99743 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.68□□□□□ -0.06
NPAS2Q99743 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.68□□□□□ -0.06
NPAS2Q99743 AC087499.6-201ENST00000411576 835 ntBASIC14.68□□□□□ -0.06
NPAS2Q99743 KRT18P64-201ENST00000434946 1219 ntBASIC14.68□□□□□ -0.06
NPAS2Q99743 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.68□□□□□ -0.06
NPAS2Q99743 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 AC025181.2-201ENST00000606994 802 ntBASIC14.68□□□□□ -0.06
NPAS2Q99743 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.68□□□□□ -0.06
NPAS2Q99743 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
NPAS2Q99743 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPAS2Q99743 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
NPAS2Q99743 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPAS2Q99743 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NPAS2Q99743 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.67□□□□□ -0.06
NPAS2Q99743 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPAS2Q99743 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPAS2Q99743 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NPAS2Q99743 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.67□□□□□ -0.06
NPAS2Q99743 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPAS2Q99743 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.67□□□□□ -0.06
NPAS2Q99743 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NPAS2Q99743 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NPAS2Q99743 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms