Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 HMGN1P4-201ENST00000419500 290 ntBASIC4.33□□□□□ -1.72
HMCN1Q96RW7 IGHJ1P-201ENST00000450690 55 ntBASIC4.33□□□□□ -1.72
HMCN1Q96RW7 RPSAP5-201ENST00000485258 884 ntBASIC4.33□□□□□ -1.72
HMCN1Q96RW7 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 TRAV33-201ENST00000557514 338 ntBASIC4.33□□□□□ -1.72
HMCN1Q96RW7 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 AL078624.1-201ENST00000604004 547 ntBASIC4.33□□□□□ -1.72
HMCN1Q96RW7 AC010326.4-201ENST00000604665 891 ntBASIC4.33□□□□□ -1.72
HMCN1Q96RW7 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HMCN1Q96RW7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 TNNT2-201ENST00000236918 1098 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 S100A4-203ENST00000368715 573 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 S100A4-204ENST00000368716 600 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 EEF1GP1-201ENST00000457231 1299 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 RPSAP70-201ENST00000504462 864 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AC008808.2-201ENST00000510349 569 ntTSL 3 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 KLF17P1-201ENST00000547105 1126 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AL392023.1-201ENST00000555655 531 ntTSL 3 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 NDUFB10P1-201ENST00000567319 521 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AC091153.4-201ENST00000570493 480 ntTSL 5 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AC022150.2-201ENST00000596451 644 ntTSL 3 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AL137028.2-201ENST00000614601 256 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 GH2-205ENST00000622506 702 ntTSL 5 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AC106820.2-201ENST00000563775 3264 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 SFPQP1-201ENST00000446621 1786 ntBASIC4.32□□□□□ -1.72
HMCN1Q96RW7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HMCN1Q96RW7 UBTFL1-201ENST00000530464 1182 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms