Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MBD3L1Q8WWY6 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 HSPA8P5-201ENST00000456928 2069 ntBASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AC092910.1-201ENST00000482027 1129 ntBASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AP000842.3-202ENST00000569238 1080 ntBASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MBD3L1Q8WWY6 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 AC135782.3-201ENST00000562782 2105 ntBASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 AL157414.3-201ENST00000624276 1954 ntBASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
MBD3L1Q8WWY6 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms