Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC073869.2-201ENST00000417338 1026 ntBASIC17.75■□□□□ 0.43
SNED1Q8TER0 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 RPL18AP8-201ENST00000486071 528 ntBASIC17.75■□□□□ 0.43
SNED1Q8TER0 PPIA-208ENST00000489459 907 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 RN7SL665P-201ENST00000578793 300 ntBASIC17.75■□□□□ 0.43
SNED1Q8TER0 EIF5AP2-201ENST00000585668 1047 ntBASIC17.75■□□□□ 0.43
SNED1Q8TER0 AC011247.3-201ENST00000603297 438 ntBASIC17.75■□□□□ 0.43
SNED1Q8TER0 AC007250.1-201ENST00000608934 338 ntBASIC17.75■□□□□ 0.43
SNED1Q8TER0 PPIA-210ENST00000620047 827 ntTSL 5 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
SNED1Q8TER0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SNED1Q8TER0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.74■□□□□ 0.43
SNED1Q8TER0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 AL451007.2-201ENST00000632004 563 ntBASIC17.74■□□□□ 0.43
SNED1Q8TER0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SNED1Q8TER0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.74■□□□□ 0.43
SNED1Q8TER0 AC092135.3-201ENST00000624151 1846 ntBASIC17.73■□□□□ 0.43
SNED1Q8TER0 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 COX20P1-201ENST00000366529 357 ntBASIC17.73■□□□□ 0.43
SNED1Q8TER0 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 MIR4472-1-201ENST00000584349 80 ntBASIC17.73■□□□□ 0.43
SNED1Q8TER0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 AL672207.1-201ENST00000328462 1570 ntBASIC17.73■□□□□ 0.43
SNED1Q8TER0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SNED1Q8TER0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 AC091951.1-201ENST00000512854 2465 ntBASIC17.73■□□□□ 0.43
SNED1Q8TER0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SNED1Q8TER0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms