Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.04■□□□□ 0.16
COLGALT1Q8NBJ5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 RN7SKP214-201ENST00000364208 315 ntBASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 ISCA2P1-201ENST00000425548 448 ntBASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AC103988.2-201ENST00000561804 725 ntBASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AL132994.2-201ENST00000603120 687 ntBASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AC023824.1-201ENST00000562945 2975 ntBASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 AC126365.1-201ENST00000578585 1514 ntBASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COLGALT1Q8NBJ5 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 AL353637.1-201ENST00000451571 732 ntBASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 LDHBP1-201ENST00000455730 1119 ntBASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.02■□□□□ 0.16
COLGALT1Q8NBJ5 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms