Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 RN7SL67P-201ENST00000492147 296 ntBASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 AKR1B10P2-201ENST00000577332 927 ntBASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 MIR4750-201ENST00000584564 56 ntBASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 RN7SL736P-201ENST00000613111 269 ntBASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 AC006213.4-201ENST00000616184 634 ntBASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 CYP4F23P-201ENST00000593402 1579 ntBASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS3Q8IXF0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 REXO1L2P-201ENST00000425429 2069 ntBASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 AL596257.1-201ENST00000641463 2694 ntBASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 AC026803.1-201ENST00000569130 274 ntBASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 FAM90A2P-201ENST00000511144 1395 ntBASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 FAM90A25P-201ENST00000528404 1395 ntBASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 CAP2P1-201ENST00000557743 1390 ntBASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS3Q8IXF0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.33■□□□□ 0.05
NPAS3Q8IXF0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 RPL8P2-201ENST00000430538 502 ntBASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
NPAS3Q8IXF0 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms