Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.87■□□□□ 0.13
RNF135Q8IUD6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
RNF135Q8IUD6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 KRT8P4-201ENST00000509735 1454 ntBASIC15.86■□□□□ 0.13
RNF135Q8IUD6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 LRRC59-203ENST00000576448 1531 ntBASIC15.86■□□□□ 0.13
RNF135Q8IUD6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 AC100850.1-201ENST00000506768 649 ntBASIC15.86■□□□□ 0.13
RNF135Q8IUD6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 AC012044.1-201ENST00000603431 297 ntBASIC15.86■□□□□ 0.13
RNF135Q8IUD6 AC073413.1-201ENST00000603927 732 ntBASIC15.86■□□□□ 0.13
RNF135Q8IUD6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 AC087481.3-201ENST00000602886 1894 ntBASIC15.86■□□□□ 0.13
RNF135Q8IUD6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RNF135Q8IUD6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 HIST2H2BB-201ENST00000449108 381 ntBASIC15.85■□□□□ 0.13
RNF135Q8IUD6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 OR10B1P-201ENST00000601666 907 ntBASIC15.85■□□□□ 0.13
RNF135Q8IUD6 MIR6756-201ENST00000616240 63 ntBASIC15.85■□□□□ 0.13
RNF135Q8IUD6 AP001065.2-201ENST00000617205 644 ntBASIC15.85■□□□□ 0.13
RNF135Q8IUD6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 AC090616.6-203ENST00000579186 1945 ntBASIC15.85■□□□□ 0.13
RNF135Q8IUD6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RNF135Q8IUD6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
RNF135Q8IUD6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms