Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 BCRP1-201ENST00000444246 691 ntBASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 FO681548.1-201ENST00000455617 1132 ntBASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 AC022137.2-201ENST00000503482 481 ntBASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 KRT18P25-201ENST00000508931 1278 ntBASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 AL136172.1-201ENST00000598590 1394 ntBASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 MSTO2P-201ENST00000314835 1709 ntBASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LETMD1Q6P1Q0 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AL138725.1-201ENST00000407347 1314 ntBASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AL162726.2-201ENST00000438986 1017 ntBASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AC093433.1-201ENST00000458048 571 ntBASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AC131206.1-201ENST00000538078 1211 ntBASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LETMD1Q6P1Q0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 MYADML-201ENST00000474610 2147 ntBASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 AL122018.1-201ENST00000446607 2310 ntBASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LETMD1Q6P1Q0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms