Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
H3F3CQ6NXT2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 AKR7A2P1-201ENST00000460134 915 ntBASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 MIR4683-201ENST00000579659 81 ntBASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 AC244452.3-201ENST00000636814 210 ntBASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 AC002472.3-201ENST00000640124 621 ntBASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 CICP14-201ENST00000629111 2732 ntBASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
H3F3CQ6NXT2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AC138028.6-201ENST00000616106 1482 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AC011840.2-201ENST00000563063 1520 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 NME6-203ENST00000415644 849 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 CALR4P-201ENST00000431943 946 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 ALG3P1-201ENST00000508806 1114 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AC008825.2-201ENST00000603374 718 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AC007663.3-201ENST00000609632 465 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 AL023803.2-201ENST00000620080 638 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 REXO1L2P-201ENST00000425429 2069 ntBASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.81□□□□□ -0.2
H3F3CQ6NXT2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms