Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 MIR3619-201ENST00000579667 83 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 AC026740.1-201ENST00000607068 791 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 AC110792.4-201ENST00000609843 298 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 BX088702.1-201ENST00000610784 235 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 AC138627.1-207ENST00000641560 1006 ntBASIC15.81■□□□□ 0.12
VARS2Q5ST30 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
VARS2Q5ST30 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
VARS2Q5ST30 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AL008707.1-201ENST00000422498 534 ntBASIC15.8■□□□□ 0.12
VARS2Q5ST30 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AC011742.3-201ENST00000439053 820 ntBASIC15.8■□□□□ 0.12
VARS2Q5ST30 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 RPS2P36-201ENST00000456516 831 ntBASIC15.8■□□□□ 0.12
VARS2Q5ST30 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AC090164.2-201ENST00000611487 516 ntBASIC15.8■□□□□ 0.12
VARS2Q5ST30 AC091544.8-201ENST00000619490 361 ntBASIC15.8■□□□□ 0.12
VARS2Q5ST30 AC128714.1-201ENST00000637035 887 ntBASIC15.8■□□□□ 0.12
VARS2Q5ST30 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 AL109954.1-202ENST00000564051 2148 ntBASIC15.8■□□□□ 0.12
VARS2Q5ST30 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.8■□□□□ 0.12
VARS2Q5ST30 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
VARS2Q5ST30 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 MTATP6P17-201ENST00000431030 672 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
VARS2Q5ST30 RN7SL769P-201ENST00000469386 295 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 MARK2P5-201ENST00000507649 634 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.79■□□□□ 0.12
VARS2Q5ST30 AL158211.1-201ENST00000566763 763 ntBASIC15.79■□□□□ 0.12
VARS2Q5ST30 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms