Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AL590440.2-201ENST00000641973 1595 ntBASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 AC068587.8-201ENST00000641239 219 ntBASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 Z98259.2-201ENST00000641583 609 ntBASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
DCAF4L1Q3SXM0 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 AC013726.1-201ENST00000563747 2285 ntBASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 AL157407.1-201ENST00000435784 904 ntBASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 KLF2P1-201ENST00000447438 1042 ntBASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 RPL18P13-201ENST00000478088 569 ntBASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
DCAF4L1Q3SXM0 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
DCAF4L1Q3SXM0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms