Protein–RNA interactions for Protein: Q309B1

TRIM16L, Tripartite motif-containing protein 16-like protein, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16LQ309B1 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 AL732292.2-201ENST00000609649 430 ntBASIC13.37□□□□□ -0.27
TRIM16LQ309B1 GGTLC5P-201ENST00000617623 998 ntBASIC13.37□□□□□ -0.27
TRIM16LQ309B1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 KHSRPP1-201ENST00000427983 1768 ntBASIC13.37□□□□□ -0.27
TRIM16LQ309B1 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRIM16LQ309B1 AC102953.2-201ENST00000609755 3026 ntBASIC13.37□□□□□ -0.27
TRIM16LQ309B1 AC006504.4-201ENST00000592118 1568 ntBASIC13.37□□□□□ -0.27
TRIM16LQ309B1 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 AC012569.1-201ENST00000591191 1524 ntBASIC13.36□□□□□ -0.27
TRIM16LQ309B1 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 GHSR-202ENST00000427970 912 ntBASIC13.36□□□□□ -0.27
TRIM16LQ309B1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 AC006557.2-201ENST00000592985 1240 ntBASIC13.36□□□□□ -0.27
TRIM16LQ309B1 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 DLX4-206ENST00000611342 1662 ntBASIC13.36□□□□□ -0.27
TRIM16LQ309B1 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TRIM16LQ309B1 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TRIM16LQ309B1 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms