Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 PUDPP3-201ENST00000445368 636 ntBASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 AC022210.1-201ENST00000449856 793 ntBASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 AC023310.1-201ENST00000554836 735 ntBASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 ZACNP1-201ENST00000612259 710 ntBASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 BX640514.1-201ENST00000583223 1918 ntBASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PRICKLE4Q2TBC4 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 CHMP1AP1-201ENST00000445563 662 ntBASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 AC119751.2-201ENST00000504529 210 ntBASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 AC103988.2-201ENST00000561804 725 ntBASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PPY2P-201ENST00000582808 702 ntBASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 KRT8P4-201ENST00000509735 1454 ntBASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
PRICKLE4Q2TBC4 AL590440.2-201ENST00000641973 1595 ntBASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
PRICKLE4Q2TBC4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
PRICKLE4Q2TBC4 AC015688.4-201ENST00000580780 1647 ntBASIC13.83□□□□□ -0.2
PRICKLE4Q2TBC4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 353.2 ms