Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TSR1Q2NL82 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TSR1Q2NL82 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.5■□□□□ 0.23
TSR1Q2NL82 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.5■□□□□ 0.23
TSR1Q2NL82 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 AC092135.3-201ENST00000624151 1846 ntBASIC16.49■□□□□ 0.23
TSR1Q2NL82 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 AC027612.4-201ENST00000605371 583 ntBASIC16.49■□□□□ 0.23
TSR1Q2NL82 AC107308.1-201ENST00000615897 301 ntBASIC16.49■□□□□ 0.23
TSR1Q2NL82 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 C1R-201ENST00000535233 2211 ntTSL 2 BASIC16.49■□□□□ 0.23
TSR1Q2NL82 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC16.49■□□□□ 0.23
TSR1Q2NL82 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TSR1Q2NL82 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 SON-203ENST00000381679 7860 ntTSL 5 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AC010327.5-201ENST00000586923 3061 ntBASIC16.48■□□□□ 0.23
TSR1Q2NL82 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AC007688.1-201ENST00000475592 759 ntBASIC16.48■□□□□ 0.23
TSR1Q2NL82 HLA-V-204ENST00000476601 1289 ntBASIC16.48■□□□□ 0.23
TSR1Q2NL82 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TSR1Q2NL82 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TSR1Q2NL82 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TSR1Q2NL82 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TSR1Q2NL82 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms