Protein–RNA interactions for Protein: Q2M389

WASHC4, WASH complex subunit 4, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WASHC4Q2M389 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
WASHC4Q2M389 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
WASHC4Q2M389 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
WASHC4Q2M389 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
WASHC4Q2M389 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 LDHBP1-201ENST00000455730 1119 ntBASIC18.4■□□□□ 0.54
WASHC4Q2M389 HNRNPA1P36-201ENST00000521313 955 ntBASIC18.4■□□□□ 0.54
WASHC4Q2M389 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.4■□□□□ 0.54
WASHC4Q2M389 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
WASHC4Q2M389 AC006486.2-201ENST00000624246 2199 ntBASIC18.4■□□□□ 0.54
WASHC4Q2M389 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
WASHC4Q2M389 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 MIR600HG-201ENST00000449175 5984 ntBASIC18.39■□□□□ 0.53
WASHC4Q2M389 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 PUDPP3-201ENST00000445368 636 ntBASIC18.39■□□□□ 0.53
WASHC4Q2M389 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 CENPX-208ENST00000584347 799 ntTSL 2 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 SHC1P1-201ENST00000425230 1745 ntBASIC18.39■□□□□ 0.53
WASHC4Q2M389 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.39■□□□□ 0.53
WASHC4Q2M389 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
WASHC4Q2M389 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
WASHC4Q2M389 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
WASHC4Q2M389 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms