Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNA1P78396 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.82■□□□□ 0.28
CCNA1P78396 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNA1P78396 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CCNA1P78396 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 TMBIM7P-202ENST00000641474 1516 ntBASIC16.81■□□□□ 0.28
CCNA1P78396 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CCNA1P78396 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNA1P78396 KRT18P36-201ENST00000411618 1276 ntBASIC16.81■□□□□ 0.28
CCNA1P78396 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 AC114501.1-201ENST00000445949 172 ntBASIC16.81■□□□□ 0.28
CCNA1P78396 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNA1P78396 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCNA1P78396 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNA1P78396 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.81■□□□□ 0.28
CCNA1P78396 AC007881.3-201ENST00000608897 607 ntBASIC16.81■□□□□ 0.28
CCNA1P78396 MIR6842-201ENST00000612539 65 ntBASIC16.81■□□□□ 0.28
CCNA1P78396 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 C18orf15-201ENST00000623680 2534 ntBASIC16.81■□□□□ 0.28
CCNA1P78396 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CCNA1P78396 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCNA1P78396 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCNA1P78396 AC011270.2-201ENST00000624293 2550 ntBASIC16.81■□□□□ 0.28
CCNA1P78396 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNA1P78396 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNA1P78396 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCNA1P78396 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 MRPL37P1-201ENST00000592451 1337 ntBASIC16.8■□□□□ 0.28
CCNA1P78396 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 MIR557-201ENST00000385239 98 ntBASIC16.8■□□□□ 0.28
CCNA1P78396 AL627422.1-201ENST00000434104 580 ntBASIC16.8■□□□□ 0.28
CCNA1P78396 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNA1P78396 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNA1P78396 NAGK-204ENST00000443872 878 ntTSL 3 BASIC16.8■□□□□ 0.28
CCNA1P78396 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNA1P78396 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.8■□□□□ 0.28
CCNA1P78396 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNA1P78396 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNA1P78396 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNA1P78396 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CCNA1P78396 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCNA1P78396 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.8■□□□□ 0.28
CCNA1P78396 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC16.8■□□□□ 0.28
CCNA1P78396 SIGLEC18P-201ENST00000602271 909 ntBASIC16.8■□□□□ 0.28
CCNA1P78396 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.8■□□□□ 0.28
CCNA1P78396 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCNA1P78396 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCNA1P78396 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCNA1P78396 AC009093.10-201ENST00000641956 1442 ntBASIC16.79■□□□□ 0.28
CCNA1P78396 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.79■□□□□ 0.28
CCNA1P78396 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms