Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.43■□□□□ 0.38
CNTNAP1P78357 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNTNAP1P78357 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 AC114947.1-202ENST00000514136 344 ntBASIC17.42■□□□□ 0.38
CNTNAP1P78357 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 AC003686.1-201ENST00000550956 1034 ntBASIC17.42■□□□□ 0.38
CNTNAP1P78357 SRP14-204ENST00000558720 780 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 AP000322.3-201ENST00000608665 388 ntBASIC17.42■□□□□ 0.38
CNTNAP1P78357 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 AL672207.1-201ENST00000328462 1570 ntBASIC17.42■□□□□ 0.38
CNTNAP1P78357 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNTNAP1P78357 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CNTNAP1P78357 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 RNA5SP359-201ENST00000364838 113 ntBASIC17.41■□□□□ 0.38
CNTNAP1P78357 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 R3HDM2P2-201ENST00000401880 2116 ntBASIC17.41■□□□□ 0.38
CNTNAP1P78357 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 PMEL-214ENST00000550447 901 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.41■□□□□ 0.38
CNTNAP1P78357 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 LINC01101-201ENST00000622953 1884 ntBASIC17.41■□□□□ 0.38
CNTNAP1P78357 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNTNAP1P78357 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.41■□□□□ 0.38
CNTNAP1P78357 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 NHP2P1-201ENST00000335274 462 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.4■□□□□ 0.38
CNTNAP1P78357 RPL35P9-201ENST00000446059 350 ntBASIC17.4■□□□□ 0.38
CNTNAP1P78357 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNTNAP1P78357 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms