Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 AC005252.3-201ENST00000623855 2258 ntBASIC13.36□□□□□ -0.27
ACTA1P68133 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.36□□□□□ -0.27
ACTA1P68133 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.36□□□□□ -0.27
ACTA1P68133 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.36□□□□□ -0.27
ACTA1P68133 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 AC139530.3-201ENST00000620344 690 ntBASIC13.36□□□□□ -0.27
ACTA1P68133 AC073592.8-201ENST00000624126 511 ntBASIC13.36□□□□□ -0.27
ACTA1P68133 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.36□□□□□ -0.27
ACTA1P68133 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.36□□□□□ -0.27
ACTA1P68133 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ACTA1P68133 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
ACTA1P68133 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.35□□□□□ -0.27
ACTA1P68133 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.35□□□□□ -0.27
ACTA1P68133 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.35□□□□□ -0.27
ACTA1P68133 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.35□□□□□ -0.27
ACTA1P68133 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 AC092364.2-202ENST00000597012 1073 ntBASIC13.35□□□□□ -0.27
ACTA1P68133 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ACTA1P68133 AL137784.3-201ENST00000623858 2288 ntBASIC13.35□□□□□ -0.27
ACTA1P68133 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.35□□□□□ -0.27
ACTA1P68133 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 AC087499.5-201ENST00000452760 1342 ntBASIC13.35□□□□□ -0.27
ACTA1P68133 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 PTENP1-202ENST00000532280 3996 ntBASIC13.35□□□□□ -0.27
ACTA1P68133 AC020910.6-201ENST00000623084 1459 ntBASIC13.35□□□□□ -0.27
ACTA1P68133 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.35□□□□□ -0.27
ACTA1P68133 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.35□□□□□ -0.27
ACTA1P68133 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ACTA1P68133 AC131212.3-201ENST00000624087 4219 ntBASIC13.34□□□□□ -0.27
ACTA1P68133 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
ACTA1P68133 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.34□□□□□ -0.27
ACTA1P68133 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ACTA1P68133 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms