Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC106886.1-201ENST00000568660 600 ntBASIC14.55□□□□□ -0.08
YBX1P67809 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.55□□□□□ -0.08
YBX1P67809 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
YBX1P67809 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
YBX1P67809 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
YBX1P67809 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.55□□□□□ -0.08
YBX1P67809 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YBX1P67809 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
YBX1P67809 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.54□□□□□ -0.08
YBX1P67809 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
YBX1P67809 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.54□□□□□ -0.08
YBX1P67809 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.54□□□□□ -0.08
YBX1P67809 POM121L8P-201ENST00000417732 1281 ntBASIC14.54□□□□□ -0.08
YBX1P67809 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.54□□□□□ -0.08
YBX1P67809 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.54□□□□□ -0.08
YBX1P67809 POM121L9P-203ENST00000441984 1285 ntBASIC14.54□□□□□ -0.08
YBX1P67809 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
YBX1P67809 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.54□□□□□ -0.08
YBX1P67809 KRT90P-201ENST00000549264 1064 ntBASIC14.54□□□□□ -0.08
YBX1P67809 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.54□□□□□ -0.08
YBX1P67809 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
YBX1P67809 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
YBX1P67809 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
YBX1P67809 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.54□□□□□ -0.08
YBX1P67809 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 AC089987.1-201ENST00000551654 2209 ntBASIC14.54□□□□□ -0.08
YBX1P67809 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
YBX1P67809 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
YBX1P67809 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
YBX1P67809 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.54□□□□□ -0.08
YBX1P67809 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
YBX1P67809 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
YBX1P67809 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 CLUHP2-201ENST00000426660 1303 ntBASIC14.53□□□□□ -0.08
YBX1P67809 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.53□□□□□ -0.08
YBX1P67809 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 ARSEP1-201ENST00000420443 635 ntBASIC14.53□□□□□ -0.08
YBX1P67809 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.53□□□□□ -0.08
YBX1P67809 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.53□□□□□ -0.08
YBX1P67809 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
YBX1P67809 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.53□□□□□ -0.08
YBX1P67809 CTBP2P5-201ENST00000454986 1264 ntBASIC14.53□□□□□ -0.08
YBX1P67809 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.53□□□□□ -0.08
YBX1P67809 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms