Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 AL021155.1-201ENST00000438808 2637 ntBASIC11.67□□□□□ -0.54
RAB5BP61020 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB5BP61020 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 MYO1C-202ENST00000361007 4734 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
RAB5BP61020 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
RAB5BP61020 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB5BP61020 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.67□□□□□ -0.54
RAB5BP61020 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 AP003071.4-201ENST00000562276 1284 ntBASIC11.67□□□□□ -0.54
RAB5BP61020 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC11.67□□□□□ -0.54
RAB5BP61020 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 HERC2P9-206ENST00000529624 5187 ntBASIC11.67□□□□□ -0.54
RAB5BP61020 LRTM2-208ENST00000543818 3986 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
RAB5BP61020 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RAB5BP61020 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RAB5BP61020 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
RAB5BP61020 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB5BP61020 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RAB5BP61020 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RAB5BP61020 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RAB5BP61020 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
RAB5BP61020 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB5BP61020 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB5BP61020 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.66□□□□□ -0.54
RAB5BP61020 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.66□□□□□ -0.54
RAB5BP61020 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
RAB5BP61020 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 AC007614.4-201ENST00000564048 1827 ntBASIC11.66□□□□□ -0.54
RAB5BP61020 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RAB5BP61020 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms