Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN20P56880 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN20P56880 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN20P56880 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN20P56880 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN20P56880 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CLDN20P56880 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN20P56880 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.74□□□□□ -0.21
CLDN20P56880 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 AL645937.2-201ENST00000396808 931 ntBASIC13.74□□□□□ -0.21
CLDN20P56880 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 AL139094.1-201ENST00000405549 1188 ntBASIC13.74□□□□□ -0.21
CLDN20P56880 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 AC234783.1-201ENST00000441761 496 ntBASIC13.74□□□□□ -0.21
CLDN20P56880 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN20P56880 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN20P56880 AC114812.1-204ENST00000449669 728 ntBASIC13.74□□□□□ -0.21
CLDN20P56880 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN20P56880 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.74□□□□□ -0.21
CLDN20P56880 IGHV3-71-201ENST00000523324 359 ntBASIC13.74□□□□□ -0.21
CLDN20P56880 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN20P56880 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.74□□□□□ -0.21
CLDN20P56880 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CLDN20P56880 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.74□□□□□ -0.21
CLDN20P56880 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CLDN20P56880 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 ZBED1P1-201ENST00000502364 1930 ntBASIC13.74□□□□□ -0.21
CLDN20P56880 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
CLDN20P56880 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CLDN20P56880 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN20P56880 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN20P56880 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN20P56880 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN20P56880 MIR1909-201ENST00000411312 80 ntBASIC13.73□□□□□ -0.21
CLDN20P56880 ATP5G2P4-201ENST00000442175 420 ntBASIC13.73□□□□□ -0.21
CLDN20P56880 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.73□□□□□ -0.21
CLDN20P56880 FTH1P14-201ENST00000482930 551 ntBASIC13.73□□□□□ -0.21
CLDN20P56880 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN20P56880 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.73□□□□□ -0.21
CLDN20P56880 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms