Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
GTF2A1P52655 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.7□□□□□ -0.06
GTF2A1P52655 PPP1R26P1-201ENST00000474415 3613 ntBASIC14.7□□□□□ -0.06
GTF2A1P52655 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
GTF2A1P52655 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 AC005622.1-201ENST00000636801 1703 ntBASIC14.69□□□□□ -0.06
GTF2A1P52655 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 LGR6-203ENST00000367278 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 TPT1P11-201ENST00000458482 498 ntBASIC14.69□□□□□ -0.06
GTF2A1P52655 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.69□□□□□ -0.06
GTF2A1P52655 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.69□□□□□ -0.06
GTF2A1P52655 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.69□□□□□ -0.06
GTF2A1P52655 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.69□□□□□ -0.06
GTF2A1P52655 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.69□□□□□ -0.06
GTF2A1P52655 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 AC010331.1-201ENST00000611423 582 ntBASIC14.69□□□□□ -0.06
GTF2A1P52655 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
GTF2A1P52655 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
GTF2A1P52655 AC127383.1-201ENST00000444697 1800 ntBASIC14.69□□□□□ -0.06
GTF2A1P52655 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.69□□□□□ -0.06
GTF2A1P52655 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 EHD1-201ENST00000320631 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 AL031133.1-201ENST00000406807 723 ntBASIC14.68□□□□□ -0.06
GTF2A1P52655 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 LINC00265-3P-201ENST00000447588 903 ntBASIC14.68□□□□□ -0.06
GTF2A1P52655 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.68□□□□□ -0.06
GTF2A1P52655 AC074051.2-201ENST00000565115 352 ntBASIC14.68□□□□□ -0.06
GTF2A1P52655 RN7SL850P-201ENST00000579959 291 ntBASIC14.68□□□□□ -0.06
GTF2A1P52655 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 AP002414.4-201ENST00000589764 1148 ntBASIC14.68□□□□□ -0.06
GTF2A1P52655 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.68□□□□□ -0.06
GTF2A1P52655 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.68□□□□□ -0.06
GTF2A1P52655 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC14.68□□□□□ -0.06
GTF2A1P52655 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
GTF2A1P52655 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms