Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CENPAP49450 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CENPAP49450 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CENPAP49450 AC026748.1-201ENST00000624349 3251 ntBASIC13.66□□□□□ -0.22
CENPAP49450 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CENPAP49450 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CENPAP49450 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CENPAP49450 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CENPAP49450 AC005089.1-201ENST00000619486 2241 ntBASIC13.66□□□□□ -0.22
CENPAP49450 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CENPAP49450 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.66□□□□□ -0.22
CENPAP49450 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CENPAP49450 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.66□□□□□ -0.22
CENPAP49450 AC004066.1-201ENST00000502488 802 ntBASIC13.66□□□□□ -0.22
CENPAP49450 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.66□□□□□ -0.22
CENPAP49450 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.66□□□□□ -0.22
CENPAP49450 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.66□□□□□ -0.22
CENPAP49450 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.66□□□□□ -0.22
CENPAP49450 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.66□□□□□ -0.22
CENPAP49450 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CENPAP49450 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.66□□□□□ -0.22
CENPAP49450 SAMD11P1-201ENST00000571429 661 ntBASIC13.66□□□□□ -0.22
CENPAP49450 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.66□□□□□ -0.22
CENPAP49450 AC015911.4-201ENST00000588022 1070 ntBASIC13.66□□□□□ -0.22
CENPAP49450 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 AL844908.2-201ENST00000609461 460 ntBASIC13.66□□□□□ -0.22
CENPAP49450 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CENPAP49450 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.66□□□□□ -0.22
CENPAP49450 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CENPAP49450 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.66□□□□□ -0.22
CENPAP49450 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CENPAP49450 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.66□□□□□ -0.22
CENPAP49450 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CENPAP49450 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
CENPAP49450 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.65□□□□□ -0.22
CENPAP49450 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.65□□□□□ -0.22
CENPAP49450 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.65□□□□□ -0.22
CENPAP49450 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CENPAP49450 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.65□□□□□ -0.22
CENPAP49450 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.65□□□□□ -0.22
CENPAP49450 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.65□□□□□ -0.22
CENPAP49450 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms