Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATF1P18846 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATF1P18846 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.16□□□□□ -0.3
ATF1P18846 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.16□□□□□ -0.3
ATF1P18846 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.16□□□□□ -0.3
ATF1P18846 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.16□□□□□ -0.3
ATF1P18846 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ATF1P18846 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATF1P18846 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 AL360270.3-201ENST00000609118 1348 ntBASIC13.15□□□□□ -0.3
ATF1P18846 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ATF1P18846 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 AL157414.3-201ENST00000624276 1954 ntBASIC13.15□□□□□ -0.3
ATF1P18846 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ATF1P18846 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.15□□□□□ -0.3
ATF1P18846 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 KRT18P13-201ENST00000400056 1290 ntBASIC13.15□□□□□ -0.3
ATF1P18846 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 AC092580.3-201ENST00000430932 139 ntBASIC13.15□□□□□ -0.3
ATF1P18846 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.15□□□□□ -0.3
ATF1P18846 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.15□□□□□ -0.3
ATF1P18846 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.15□□□□□ -0.3
ATF1P18846 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.15□□□□□ -0.3
ATF1P18846 AC097493.3-201ENST00000509725 367 ntBASIC13.15□□□□□ -0.3
ATF1P18846 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 AC092337.1-201ENST00000568699 1129 ntBASIC13.15□□□□□ -0.3
ATF1P18846 AL158211.3-201ENST00000607385 239 ntBASIC13.15□□□□□ -0.3
ATF1P18846 AL590560.3-201ENST00000623350 461 ntBASIC13.15□□□□□ -0.3
ATF1P18846 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.15□□□□□ -0.3
ATF1P18846 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATF1P18846 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.15□□□□□ -0.3
ATF1P18846 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms