Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 LST1-206ENST00000376090 689 ntTSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 LST1-209ENST00000376096 565 ntTSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 LST1-210ENST00000376099 610 ntTSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 LST1-214ENST00000418507 726 ntTSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 MEP1AP4-201ENST00000423244 1087 ntBASIC13.81□□□□□ -0.2
BMP4P12644 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 AC244107.1-201ENST00000442033 332 ntBASIC13.81□□□□□ -0.2
BMP4P12644 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.81□□□□□ -0.2
BMP4P12644 AC009477.1-201ENST00000452936 217 ntBASIC13.81□□□□□ -0.2
BMP4P12644 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.81□□□□□ -0.2
BMP4P12644 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.81□□□□□ -0.2
BMP4P12644 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.81□□□□□ -0.2
BMP4P12644 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
BMP4P12644 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.81□□□□□ -0.2
BMP4P12644 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.8□□□□□ -0.2
BMP4P12644 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
BMP4P12644 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
BMP4P12644 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
BMP4P12644 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
BMP4P12644 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.8□□□□□ -0.2
BMP4P12644 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.8□□□□□ -0.2
BMP4P12644 AC012497.1-201ENST00000429392 575 ntBASIC13.8□□□□□ -0.2
BMP4P12644 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 SDHAP3-202ENST00000515467 728 ntBASIC13.8□□□□□ -0.2
BMP4P12644 AC135586.1-201ENST00000539323 574 ntBASIC13.8□□□□□ -0.2
BMP4P12644 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.8□□□□□ -0.2
BMP4P12644 CR383656.12-201ENST00000549567 513 ntBASIC13.8□□□□□ -0.2
BMP4P12644 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 AL133215.2-201ENST00000609242 977 ntBASIC13.8□□□□□ -0.2
BMP4P12644 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 AL035252.4-201ENST00000624174 288 ntBASIC13.8□□□□□ -0.2
BMP4P12644 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
BMP4P12644 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.8□□□□□ -0.2
BMP4P12644 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 KRT8P12-202ENST00000472924 1397 ntBASIC13.8□□□□□ -0.2
BMP4P12644 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.8□□□□□ -0.2
BMP4P12644 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
BMP4P12644 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms