Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 TREML5P-201ENST00000421694 576 ntBASIC13.17□□□□□ -0.3
UBCP0CG48 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.17□□□□□ -0.3
UBCP0CG48 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 AC009477.1-201ENST00000452936 217 ntBASIC13.17□□□□□ -0.3
UBCP0CG48 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 RPL13AP25-201ENST00000484130 612 ntBASIC13.17□□□□□ -0.3
UBCP0CG48 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.17□□□□□ -0.3
UBCP0CG48 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 AC026410.3-201ENST00000514280 936 ntBASIC13.17□□□□□ -0.3
UBCP0CG48 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
UBCP0CG48 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.17□□□□□ -0.3
UBCP0CG48 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UBCP0CG48 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.17□□□□□ -0.3
UBCP0CG48 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBCP0CG48 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.16□□□□□ -0.3
UBCP0CG48 CLK3P2-201ENST00000427566 1453 ntBASIC13.16□□□□□ -0.3
UBCP0CG48 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBCP0CG48 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.16□□□□□ -0.3
UBCP0CG48 FAM86LP-201ENST00000478302 853 ntBASIC13.16□□□□□ -0.3
UBCP0CG48 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.16□□□□□ -0.3
UBCP0CG48 IGHV3-42-201ENST00000520410 361 ntBASIC13.16□□□□□ -0.3
UBCP0CG48 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.16□□□□□ -0.3
UBCP0CG48 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.16□□□□□ -0.3
UBCP0CG48 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.16□□□□□ -0.3
UBCP0CG48 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBCP0CG48 AL049840.4-201ENST00000602422 811 ntBASIC13.16□□□□□ -0.3
UBCP0CG48 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.16□□□□□ -0.3
UBCP0CG48 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBCP0CG48 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBCP0CG48 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms