Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC114947.1-202ENST00000514136 344 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC6P09630 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC6P09630 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC6P09630 AC003686.1-201ENST00000550956 1034 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 MIR4522-201ENST00000584932 87 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 AC009084.3-201ENST00000623356 437 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 MROH4P-201ENST00000431302 1578 ntBASIC16.67■□□□□ 0.26
HOXC6P09630 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC6P09630 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC6P09630 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC6P09630 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC6P09630 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC6P09630 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC6P09630 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXC6P09630 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC6P09630 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXC6P09630 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.66■□□□□ 0.26
HOXC6P09630 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC6P09630 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
HOXC6P09630 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXC6P09630 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC6P09630 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HOXC6P09630 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC6P09630 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXC6P09630 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXC6P09630 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 MIR6756-201ENST00000616240 63 ntBASIC16.66■□□□□ 0.26
HOXC6P09630 MIR6858-201ENST00000620733 67 ntBASIC16.66■□□□□ 0.26
HOXC6P09630 AC013268.4-201ENST00000637413 2228 ntBASIC16.66■□□□□ 0.26
HOXC6P09630 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HOXC6P09630 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC6P09630 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC6P09630 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
HOXC6P09630 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 WASH3P-207ENST00000560956 1394 ntBASIC16.65■□□□□ 0.26
HOXC6P09630 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC6P09630 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 AC073347.1-201ENST00000421633 2643 ntBASIC16.65■□□□□ 0.26
HOXC6P09630 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXC6P09630 AL807761.2-201ENST00000422849 729 ntBASIC16.65■□□□□ 0.26
HOXC6P09630 FTH1P22-201ENST00000456305 520 ntBASIC16.65■□□□□ 0.26
HOXC6P09630 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC6P09630 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC6P09630 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC6P09630 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC6P09630 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 HYMAI-201ENST00000635591 3347 ntBASIC16.65■□□□□ 0.26
HOXC6P09630 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC6P09630 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC6P09630 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HOXC6P09630 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
HOXC6P09630 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC6P09630 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC6P09630 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.65■□□□□ 0.26
HOXC6P09630 AC025271.4-201ENST00000621477 1726 ntBASIC16.65■□□□□ 0.26
HOXC6P09630 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.64■□□□□ 0.25
HOXC6P09630 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HOXC6P09630 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms