Protein–RNA interactions for Protein: P08397

HMBS, Porphobilinogen deaminase, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBSP08397 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
HMBSP08397 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.52■□□□□ 0.08
HMBSP08397 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.52■□□□□ 0.08
HMBSP08397 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HMBSP08397 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.52■□□□□ 0.08
HMBSP08397 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 AL513477.1-201ENST00000602865 2407 ntBASIC15.52■□□□□ 0.08
HMBSP08397 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
HMBSP08397 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 AL136309.1-201ENST00000403917 691 ntBASIC15.52■□□□□ 0.08
HMBSP08397 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.52■□□□□ 0.08
HMBSP08397 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.52■□□□□ 0.08
HMBSP08397 AC079178.1-201ENST00000420915 656 ntBASIC15.52■□□□□ 0.08
HMBSP08397 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.52■□□□□ 0.08
HMBSP08397 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
HMBSP08397 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
HMBSP08397 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.52■□□□□ 0.08
HMBSP08397 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.52■□□□□ 0.08
HMBSP08397 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.52■□□□□ 0.08
HMBSP08397 AL136301.1-201ENST00000615830 422 ntBASIC15.52■□□□□ 0.08
HMBSP08397 AC244157.2-201ENST00000616239 1006 ntBASIC15.52■□□□□ 0.08
HMBSP08397 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.52■□□□□ 0.07
HMBSP08397 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
HMBSP08397 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.52■□□□□ 0.07
HMBSP08397 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
HMBSP08397 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.51■□□□□ 0.07
HMBSP08397 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 AL591846.1-201ENST00000451736 433 ntBASIC15.51■□□□□ 0.07
HMBSP08397 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.51■□□□□ 0.07
HMBSP08397 AC099548.2-209ENST00000480264 625 ntBASIC15.51■□□□□ 0.07
HMBSP08397 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 FAM8A2P-201ENST00000528813 1142 ntBASIC15.51■□□□□ 0.07
HMBSP08397 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
HMBSP08397 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 AL358472.3-201ENST00000608147 415 ntBASIC15.51■□□□□ 0.07
HMBSP08397 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HMBSP08397 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC15.51■□□□□ 0.07
HMBSP08397 AJ011931.1-201ENST00000618749 2492 ntBASIC15.51■□□□□ 0.07
HMBSP08397 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HMBSP08397 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
HMBSP08397 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HMBSP08397 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HMBSP08397 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 AC103702.1-201ENST00000548801 2630 ntBASIC15.5■□□□□ 0.07
HMBSP08397 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.5■□□□□ 0.07
HMBSP08397 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.5■□□□□ 0.07
HMBSP08397 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.5■□□□□ 0.07
HMBSP08397 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMBSP08397 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.5■□□□□ 0.07
HMBSP08397 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.5■□□□□ 0.07
HMBSP08397 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms