Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TPM2P07951 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TPM2P07951 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM2P07951 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TPM2P07951 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TPM2P07951 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TPM2P07951 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.1■□□□□ 0.33
TPM2P07951 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM2P07951 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.1■□□□□ 0.33
TPM2P07951 MIR3687-2-201ENST00000577708 61 ntBASIC17.1■□□□□ 0.33
TPM2P07951 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
TPM2P07951 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.1■□□□□ 0.33
TPM2P07951 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.1■□□□□ 0.33
TPM2P07951 AC004835.2-201ENST00000603762 682 ntBASIC17.1■□□□□ 0.33
TPM2P07951 MIR3687-1-201ENST00000614492 61 ntBASIC17.1■□□□□ 0.33
TPM2P07951 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.1■□□□□ 0.33
TPM2P07951 MIR6069-201ENST00000620069 79 ntBASIC17.1■□□□□ 0.33
TPM2P07951 AL513210.1-201ENST00000629608 234 ntBASIC17.1■□□□□ 0.33
TPM2P07951 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM2P07951 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.1■□□□□ 0.33
TPM2P07951 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TPM2P07951 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.1■□□□□ 0.33
TPM2P07951 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TPM2P07951 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TPM2P07951 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TPM2P07951 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.1■□□□□ 0.33
TPM2P07951 AC068760.1-201ENST00000493579 1953 ntBASIC17.09■□□□□ 0.33
TPM2P07951 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TPM2P07951 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TPM2P07951 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.09■□□□□ 0.33
TPM2P07951 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 SERBP1P3-201ENST00000459980 809 ntBASIC17.09■□□□□ 0.33
TPM2P07951 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 AP000344.2-201ENST00000512987 629 ntBASIC17.09■□□□□ 0.33
TPM2P07951 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 BANF1P1-201ENST00000553684 263 ntBASIC17.09■□□□□ 0.33
TPM2P07951 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.09■□□□□ 0.33
TPM2P07951 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TPM2P07951 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC17.09■□□□□ 0.33
TPM2P07951 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TPM2P07951 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
TPM2P07951 AL731571.1-201ENST00000617058 5428 ntBASIC17.08■□□□□ 0.33
TPM2P07951 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TPM2P07951 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM2P07951 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TPM2P07951 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TPM2P07951 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM2P07951 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TPM2P07951 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TPM2P07951 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
TPM2P07951 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TPM2P07951 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TPM2P07951 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM2P07951 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM2P07951 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TPM2P07951 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.08■□□□□ 0.32
TPM2P07951 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.08■□□□□ 0.32
TPM2P07951 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TPM2P07951 FAM58DP-201ENST00000428076 619 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms