Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 SAMD11P1-201ENST00000571429 661 ntBASIC12.25□□□□□ -0.45
SSSCA1O60232 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.25□□□□□ -0.45
SSSCA1O60232 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SSSCA1O60232 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
SSSCA1O60232 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.25□□□□□ -0.45
SSSCA1O60232 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SSSCA1O60232 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 AL157414.3-201ENST00000624276 1954 ntBASIC12.25□□□□□ -0.45
SSSCA1O60232 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.25□□□□□ -0.45
SSSCA1O60232 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SSSCA1O60232 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSSCA1O60232 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
SSSCA1O60232 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
SSSCA1O60232 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.24□□□□□ -0.45
SSSCA1O60232 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.24□□□□□ -0.45
SSSCA1O60232 KRT18P43-201ENST00000469825 1281 ntBASIC12.24□□□□□ -0.45
SSSCA1O60232 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.24□□□□□ -0.45
SSSCA1O60232 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 AL356585.2-201ENST00000625078 2396 ntBASIC12.24□□□□□ -0.45
SSSCA1O60232 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
SSSCA1O60232 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SSSCA1O60232 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SSSCA1O60232 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SSSCA1O60232 AL121723.1-201ENST00000445194 1519 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 CYP2AB1P-202ENST00000454440 1456 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
SSSCA1O60232 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.23□□□□□ -0.45
SSSCA1O60232 KRT8P12-202ENST00000472924 1397 ntBASIC12.23□□□□□ -0.45
SSSCA1O60232 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms