Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CDC7O00311 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.67□□□□□ -0.06
CDC7O00311 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CDC7O00311 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.67□□□□□ -0.06
CDC7O00311 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CDC7O00311 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 C8orf49-201ENST00000525043 1968 ntBASIC14.66□□□□□ -0.06
CDC7O00311 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.66□□□□□ -0.06
CDC7O00311 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.66□□□□□ -0.06
CDC7O00311 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.66□□□□□ -0.06
CDC7O00311 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.66□□□□□ -0.06
CDC7O00311 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 AC145423.3-201ENST00000615987 467 ntBASIC14.66□□□□□ -0.06
CDC7O00311 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CDC7O00311 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 AC152010.1-201ENST00000415779 2006 ntBASIC14.66□□□□□ -0.06
CDC7O00311 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
CDC7O00311 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.66□□□□□ -0.06
CDC7O00311 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDC7O00311 AC134312.5-201ENST00000568031 1313 ntBASIC14.66□□□□□ -0.06
CDC7O00311 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDC7O00311 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 BAATP1-201ENST00000412284 1225 ntBASIC14.65□□□□□ -0.06
CDC7O00311 TLE1P1-201ENST00000422965 589 ntBASIC14.65□□□□□ -0.06
CDC7O00311 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 AC012441.1-201ENST00000446669 685 ntBASIC14.65□□□□□ -0.06
CDC7O00311 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.65□□□□□ -0.06
CDC7O00311 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.65□□□□□ -0.06
CDC7O00311 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 MIR5189-201ENST00000577370 114 ntBASIC14.65□□□□□ -0.06
CDC7O00311 AC092364.2-202ENST00000597012 1073 ntBASIC14.65□□□□□ -0.06
CDC7O00311 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDC7O00311 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDC7O00311 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms