Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LILRP1-201ENST00000444199 1370 ntBASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC016734.2-201ENST00000624325 1377 ntBASIC9.49□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ZFAT-209ENST00000520727 4686 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC024075.2-201ENST00000598112 1473 ntBASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 NUS1P2-201ENST00000417358 873 ntBASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC092474.2-201ENST00000424288 719 ntBASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LAGE3P1-201ENST00000425356 484 ntBASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AL139010.1-201ENST00000454878 894 ntBASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 DLX4-206ENST00000611342 1662 ntBASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
TMEM256-PLSCR3K7ERE1 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms