Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 LINC01225-203ENST00000563550 1244 ntBASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AC105021.1-202ENST00000570572 669 ntBASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AL513190.1-201ENST00000621254 727 ntBASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AC089987.1-201ENST00000551654 2209 ntBASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
KCNIP3Q9Y2W7 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
KCNIP3Q9Y2W7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.39
KCNIP3Q9Y2W7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
KCNIP3Q9Y2W7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.58□□□□□ -0.39
KCNIP3Q9Y2W7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AC007967.2-201ENST00000432613 625 ntBASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 HIST3H2BA-201ENST00000436555 524 ntBASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AC145285.3-201ENST00000564603 959 ntBASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AC091812.2-201ENST00000619081 385 ntBASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AC055717.3-201ENST00000622967 595 ntBASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.58□□□□□ -0.4
KCNIP3Q9Y2W7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
KCNIP3Q9Y2W7 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms