Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC22.61■■□□□ 1.21
RIMBP3Q9UFD9 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 PGK1P2-201ENST00000431702 1214 ntBASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 RN7SL677P-201ENST00000466970 319 ntBASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 AC010319.2-201ENST00000594663 892 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 KHSRPP1-201ENST00000427983 1768 ntBASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 FTLP3-201ENST00000427242 528 ntBASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CMC2-204ENST00000562713 573 ntTSL 3 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 CMC2-209ENST00000565108 399 ntTSL 2 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 PCTP-206ENST00000573500 919 ntTSL 3 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 MIR5091-201ENST00000578707 93 ntBASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 AL049840.2-201ENST00000602722 535 ntBASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
RIMBP3Q9UFD9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 AC092115.1-201ENST00000566277 1402 ntBASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 CHCHD2P6-201ENST00000454346 447 ntBASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 CFL1P1-204ENST00000456375 424 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 AC103724.2-201ENST00000520355 476 ntBASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 CACNA1C-IT3-201ENST00000542680 622 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 MIR4309-201ENST00000582498 83 ntBASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 KRT8P43-201ENST00000406052 1458 ntBASIC22.59■■□□□ 1.21
RIMBP3Q9UFD9 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 RPL10-203ENST00000406022 748 ntTSL 3 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 SNORD88B-201ENST00000408454 91 ntBASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 SOX2-OT-221ENST00000594942 675 ntTSL 5 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 PDLIM1P1-201ENST00000604187 969 ntBASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 AC010335.3-201ENST00000623767 531 ntBASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 IL4R-219ENST00000628578 201 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
RIMBP3Q9UFD9 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RIMBP3Q9UFD9 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms