Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 GHSR-202ENST00000427970 912 ntBASIC17.41■□□□□ 0.38
EFCC1Q9HA90 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 AC005357.2-202ENST00000590507 1060 ntBASIC17.41■□□□□ 0.38
EFCC1Q9HA90 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.41■□□□□ 0.38
EFCC1Q9HA90 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 RN7SKP214-201ENST00000364208 315 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 AC097065.1-201ENST00000425737 517 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 RPL18P13-201ENST00000478088 569 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 AC005324.6-201ENST00000587972 613 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 AC138466.3-201ENST00000619983 221 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 NAP1L6-202ENST00000641404 1222 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.4■□□□□ 0.38
EFCC1Q9HA90 AC092127.1-201ENST00000567093 3455 ntBASIC17.4■□□□□ 0.38
EFCC1Q9HA90 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EFCC1Q9HA90 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
EFCC1Q9HA90 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.39■□□□□ 0.38
EFCC1Q9HA90 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
EFCC1Q9HA90 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
EFCC1Q9HA90 TBC1D3J-201ENST00000620719 1426 ntBASIC17.39■□□□□ 0.38
EFCC1Q9HA90 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 AL627231.1-201ENST00000394467 1125 ntBASIC17.39■□□□□ 0.37
EFCC1Q9HA90 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms