Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC9.94□□□□□ -0.82
LITAFQ99732 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 SPDYE17-201ENST00000412399 783 ntBASIC9.94□□□□□ -0.82
LITAFQ99732 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC9.94□□□□□ -0.82
LITAFQ99732 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC9.94□□□□□ -0.82
LITAFQ99732 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC9.94□□□□□ -0.82
LITAFQ99732 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 NME3-204ENST00000563498 920 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 AP000842.3-202ENST00000569238 1080 ntBASIC9.94□□□□□ -0.82
LITAFQ99732 AC092364.2-202ENST00000597012 1073 ntBASIC9.94□□□□□ -0.82
LITAFQ99732 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC9.94□□□□□ -0.82
LITAFQ99732 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC9.94□□□□□ -0.82
LITAFQ99732 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC9.94□□□□□ -0.82
LITAFQ99732 HFE2-206ENST00000634927 506 ntTSL 4 BASIC9.94□□□□□ -0.82
LITAFQ99732 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
LITAFQ99732 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 GOLGA2P5-201ENST00000266746 2395 ntBASIC9.94□□□□□ -0.82
LITAFQ99732 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
LITAFQ99732 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC9.94□□□□□ -0.82
LITAFQ99732 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
LITAFQ99732 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
LITAFQ99732 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 F2-205ENST00000530231 1849 ntTSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC9.93□□□□□ -0.82
LITAFQ99732 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
LITAFQ99732 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 HLA-K-203ENST00000430151 1046 ntBASIC9.93□□□□□ -0.82
LITAFQ99732 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 AC092910.1-201ENST00000482027 1129 ntBASIC9.93□□□□□ -0.82
LITAFQ99732 AC034105.1-201ENST00000563488 319 ntBASIC9.93□□□□□ -0.82
LITAFQ99732 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
LITAFQ99732 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
LITAFQ99732 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
LITAFQ99732 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
LITAFQ99732 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms