Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 TSEN15P1-201ENST00000423257 515 ntBASIC12.72□□□□□ -0.37
CLCC1Q96S66 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CLCC1Q96S66 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLCC1Q96S66 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 PHKG1P2-201ENST00000457537 863 ntBASIC12.71□□□□□ -0.37
CLCC1Q96S66 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 BANF1P1-201ENST00000553684 263 ntBASIC12.71□□□□□ -0.37
CLCC1Q96S66 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 AL589739.1-201ENST00000607720 493 ntBASIC12.71□□□□□ -0.37
CLCC1Q96S66 AC007967.4-201ENST00000614700 386 ntBASIC12.71□□□□□ -0.37
CLCC1Q96S66 AP001059.3-201ENST00000619053 235 ntBASIC12.71□□□□□ -0.37
CLCC1Q96S66 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLCC1Q96S66 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.71□□□□□ -0.37
CLCC1Q96S66 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
CLCC1Q96S66 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.38
CLCC1Q96S66 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
CLCC1Q96S66 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.38
CLCC1Q96S66 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.71□□□□□ -0.38
CLCC1Q96S66 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.71□□□□□ -0.38
CLCC1Q96S66 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLCC1Q96S66 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.7□□□□□ -0.38
CLCC1Q96S66 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLCC1Q96S66 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.7□□□□□ -0.38
CLCC1Q96S66 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CLCC1Q96S66 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLCC1Q96S66 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLCC1Q96S66 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLCC1Q96S66 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLCC1Q96S66 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLCC1Q96S66 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms