Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
USP6NLQ92738 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16.8■□□□□ 0.28
USP6NLQ92738 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.8■□□□□ 0.28
USP6NLQ92738 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC16.8■□□□□ 0.28
USP6NLQ92738 SIGLEC18P-201ENST00000602271 909 ntBASIC16.8■□□□□ 0.28
USP6NLQ92738 AC133540.1-201ENST00000620845 1019 ntBASIC16.8■□□□□ 0.28
USP6NLQ92738 AC009084.3-201ENST00000623356 437 ntBASIC16.8■□□□□ 0.28
USP6NLQ92738 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.8■□□□□ 0.28
USP6NLQ92738 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USP6NLQ92738 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.8■□□□□ 0.28
USP6NLQ92738 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.79■□□□□ 0.28
USP6NLQ92738 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.79■□□□□ 0.28
USP6NLQ92738 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.79■□□□□ 0.28
USP6NLQ92738 AC015909.3-201ENST00000572855 1794 ntBASIC16.79■□□□□ 0.28
USP6NLQ92738 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.79■□□□□ 0.28
USP6NLQ92738 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
USP6NLQ92738 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.79■□□□□ 0.28
USP6NLQ92738 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.79■□□□□ 0.28
USP6NLQ92738 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.79■□□□□ 0.28
USP6NLQ92738 AL035414.1-201ENST00000451327 857 ntBASIC16.79■□□□□ 0.28
USP6NLQ92738 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.79■□□□□ 0.28
USP6NLQ92738 AC131206.1-201ENST00000538078 1211 ntBASIC16.79■□□□□ 0.28
USP6NLQ92738 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.79■□□□□ 0.28
USP6NLQ92738 MIR3188-201ENST00000583494 85 ntBASIC16.79■□□□□ 0.28
USP6NLQ92738 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USP6NLQ92738 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 AC092850.2-201ENST00000623821 2697 ntBASIC16.79■□□□□ 0.28
USP6NLQ92738 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
USP6NLQ92738 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.79■□□□□ 0.28
USP6NLQ92738 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USP6NLQ92738 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USP6NLQ92738 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.78■□□□□ 0.28
USP6NLQ92738 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
USP6NLQ92738 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
USP6NLQ92738 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC16.78■□□□□ 0.28
USP6NLQ92738 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.78■□□□□ 0.28
USP6NLQ92738 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.78■□□□□ 0.28
USP6NLQ92738 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 AP000358.1-201ENST00000456260 156 ntBASIC16.78■□□□□ 0.28
USP6NLQ92738 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.78■□□□□ 0.28
USP6NLQ92738 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.78■□□□□ 0.28
USP6NLQ92738 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.78■□□□□ 0.28
USP6NLQ92738 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.78■□□□□ 0.28
USP6NLQ92738 AC009560.1-201ENST00000620208 434 ntBASIC16.78■□□□□ 0.28
USP6NLQ92738 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.78■□□□□ 0.28
USP6NLQ92738 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
USP6NLQ92738 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
USP6NLQ92738 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms