Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC005229.1-201ENST00000392885 409 ntBASIC15.87■□□□□ 0.13
DDX1Q92499 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.87■□□□□ 0.13
DDX1Q92499 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.87■□□□□ 0.13
DDX1Q92499 AC079316.1-201ENST00000548397 411 ntBASIC15.87■□□□□ 0.13
DDX1Q92499 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.87■□□□□ 0.13
DDX1Q92499 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
DDX1Q92499 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
DDX1Q92499 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 AC092135.3-201ENST00000624151 1846 ntBASIC15.87■□□□□ 0.13
DDX1Q92499 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.87■□□□□ 0.13
DDX1Q92499 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
DDX1Q92499 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
DDX1Q92499 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.86■□□□□ 0.13
DDX1Q92499 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.86■□□□□ 0.13
DDX1Q92499 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
DDX1Q92499 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 YBX1P6-201ENST00000442962 1002 ntBASIC15.86■□□□□ 0.13
DDX1Q92499 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.86■□□□□ 0.13
DDX1Q92499 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.86■□□□□ 0.13
DDX1Q92499 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.86■□□□□ 0.13
DDX1Q92499 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.86■□□□□ 0.13
DDX1Q92499 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.86■□□□□ 0.13
DDX1Q92499 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.86■□□□□ 0.13
DDX1Q92499 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 AP001002.3-201ENST00000623482 206 ntBASIC15.86■□□□□ 0.13
DDX1Q92499 AC132938.4-201ENST00000623835 848 ntBASIC15.86■□□□□ 0.13
DDX1Q92499 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.86■□□□□ 0.13
DDX1Q92499 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 MRPL37P1-201ENST00000592451 1337 ntBASIC15.86■□□□□ 0.13
DDX1Q92499 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
DDX1Q92499 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.86■□□□□ 0.13
DDX1Q92499 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
DDX1Q92499 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
DDX1Q92499 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
DDX1Q92499 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.85■□□□□ 0.13
DDX1Q92499 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 AC152010.1-201ENST00000415779 2006 ntBASIC15.85■□□□□ 0.13
DDX1Q92499 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.85■□□□□ 0.13
DDX1Q92499 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
DDX1Q92499 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms