Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCNYL1Q8N7R7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCNYL1Q8N7R7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 HLA-K-203ENST00000430151 1046 ntBASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 GAPDHP40-201ENST00000505218 1006 ntBASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 AC097493.3-201ENST00000509725 367 ntBASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 ZNF890P-202ENST00000530367 1156 ntBASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 AL590560.3-201ENST00000623350 461 ntBASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCNYL1Q8N7R7 AC092135.3-201ENST00000624151 1846 ntBASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 AL589987.1-201ENST00000453380 819 ntBASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 IGHV3-42-201ENST00000520410 361 ntBASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCNYL1Q8N7R7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.81□□□□□ -0.04
CCNYL1Q8N7R7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms