Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.82■□□□□ 0.12
CNKSR3Q6P9H4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 AL512306.1-201ENST00000432698 848 ntBASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 IL9RP3-201ENST00000442856 1674 ntBASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 AL365203.3-201ENST00000609742 2057 ntBASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 LINC01101-201ENST00000622953 1884 ntBASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 AC138466.5-201ENST00000624002 808 ntBASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CNKSR3Q6P9H4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 AL357563.1-201ENST00000404728 395 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 GUSBP10-201ENST00000417412 665 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 ST13P19-201ENST00000442505 1124 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 C2orf69P1-201ENST00000563532 1093 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 MIR5196-201ENST00000578146 115 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 AC005041.3-201ENST00000606287 649 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 FO393412.1-201ENST00000619841 382 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 AC138466.4-201ENST00000623965 852 ntBASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CNKSR3Q6P9H4 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CNKSR3Q6P9H4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms