Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LPCAT4Q643R3 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.12□□□□□ -0.15
LPCAT4Q643R3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 AC027307.2-201ENST00000591252 911 ntBASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 AL031008.1-201ENST00000619963 541 ntBASIC14.12□□□□□ -0.15
LPCAT4Q643R3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 AC025580.3-201ENST00000617932 1424 ntBASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
LPCAT4Q643R3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 VENTXP1-201ENST00000569334 2716 ntBASIC14.11□□□□□ -0.15
LPCAT4Q643R3 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
LPCAT4Q643R3 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms