Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 TPM3P8-201ENST00000330554 643 ntBASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 ANKRD19P-201ENST00000338192 862 ntBASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 AC138951.2-201ENST00000623455 1161 ntBASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.61■□□□□ 0.09
TTC39BQ5VTQ0 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 SBF1P1-201ENST00000444527 5631 ntBASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AC006001.1-201ENST00000325130 474 ntBASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 FAM197Y7-201ENST00000432892 766 ntBASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AC119751.2-201ENST00000504529 210 ntBASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AL008721.1-201ENST00000609964 604 ntBASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
TTC39BQ5VTQ0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TTC39BQ5VTQ0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms