Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LRRK2Q5S007 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LRRK2Q5S007 HCG11-201ENST00000411553 5696 ntBASIC12.69□□□□□ -0.38
LRRK2Q5S007 HLA-DMA-202ENST00000395303 1007 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 CDCA4P4-201ENST00000435216 680 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 SCARNA12-201ENST00000459155 270 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 AC025186.1-201ENST00000478174 870 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 RN7SL767P-201ENST00000493013 295 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AP003785.1-201ENST00000544959 492 ntTSL 4 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AC112504.1-201ENST00000623415 1841 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AL121949.3-201ENST00000406684 385 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 MED15P3-201ENST00000413613 326 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 TMA16-204ENST00000508268 608 ntTSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 BX088702.1-201ENST00000610784 235 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AC127383.1-201ENST00000444697 1800 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AC138761.6-201ENST00000583997 1423 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 AC010491.1-201ENST00000563101 2797 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LRRK2Q5S007 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LRRK2Q5S007 ZBED1P1-201ENST00000502364 1930 ntBASIC12.68□□□□□ -0.38
LRRK2Q5S007 FKBP4P8-201ENST00000610931 1369 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 FDPSP7-201ENST00000429043 1054 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 SRP14-208ENST00000560773 468 ntTSL 3 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 SIGLEC22P-201ENST00000599104 714 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 AC020922.4-201ENST00000621389 339 ntBASIC12.67□□□□□ -0.38
LRRK2Q5S007 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LRRK2Q5S007 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.67□□□□□ -0.38
LRRK2Q5S007 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms