Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 MBP-201ENST00000354542 575 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 RPS9P1-201ENST00000419943 583 ntBASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 TSPY25P-201ENST00000429463 745 ntBASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 OR2R1P-201ENST00000441404 914 ntBASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 RN7SL8P-201ENST00000461771 266 ntBASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 AC005632.3-201ENST00000605544 308 ntBASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRIM71Q2Q1W2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 SSR4P1-203ENST00000599569 2260 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AP000356.3-201ENST00000382243 753 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AL512430.1-201ENST00000392575 860 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 BANF1P3-201ENST00000412556 261 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AP000358.1-201ENST00000456260 156 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AP002803.1-201ENST00000528836 498 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 PGAM1P5-201ENST00000548011 764 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 RPL17P45-201ENST00000586289 509 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 SIGLEC18P-201ENST00000602271 909 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 AC007881.3-201ENST00000608897 607 ntBASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM71Q2Q1W2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms