Protein–RNA interactions for Protein: Q2M329

CCDC96, Coiled-coil domain-containing protein 96, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC96Q2M329 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.41■□□□□ 0.38
CCDC96Q2M329 AC006033.1-201ENST00000440505 426 ntBASIC17.41■□□□□ 0.38
CCDC96Q2M329 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 AL136301.1-201ENST00000615830 422 ntBASIC17.41■□□□□ 0.38
CCDC96Q2M329 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 AL138725.1-201ENST00000407347 1314 ntBASIC17.41■□□□□ 0.38
CCDC96Q2M329 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
CCDC96Q2M329 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCDC96Q2M329 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 MIR1247-201ENST00000408206 136 ntBASIC17.4■□□□□ 0.38
CCDC96Q2M329 MIR663B-201ENST00000408361 115 ntBASIC17.4■□□□□ 0.38
CCDC96Q2M329 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AL358472.3-201ENST00000608147 415 ntBASIC17.4■□□□□ 0.38
CCDC96Q2M329 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 ACE3P-201ENST00000423435 1973 ntBASIC17.4■□□□□ 0.38
CCDC96Q2M329 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 SALL4P5-201ENST00000419001 1760 ntBASIC17.4■□□□□ 0.38
CCDC96Q2M329 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CCDC96Q2M329 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCDC96Q2M329 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
CCDC96Q2M329 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CCDC96Q2M329 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.39■□□□□ 0.38
CCDC96Q2M329 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.39■□□□□ 0.38
CCDC96Q2M329 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC96Q2M329 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC96Q2M329 ZBED1P1-201ENST00000502364 1930 ntBASIC17.39■□□□□ 0.37
CCDC96Q2M329 AC006486.2-201ENST00000624246 2199 ntBASIC17.39■□□□□ 0.37
CCDC96Q2M329 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC96Q2M329 AC003102.2-201ENST00000589195 1469 ntBASIC17.39■□□□□ 0.37
CCDC96Q2M329 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.39■□□□□ 0.37
CCDC96Q2M329 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCDC96Q2M329 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC17.39■□□□□ 0.37
CCDC96Q2M329 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms