Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
HIST1H1AQ02539 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC005562.1-201ENST00000583030 3219 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AL928921.2-201ENST00000641325 2442 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 RPL13P2-201ENST00000440687 659 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 TIMM17BP1-201ENST00000545713 516 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC140878.1-201ENST00000565277 250 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC093028.1-201ENST00000622998 982 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 FP325330.2-201ENST00000624219 5630 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.55□□□□□ -0.56
HIST1H1AQ02539 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
HIST1H1AQ02539 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 TREML5P-201ENST00000421694 576 ntBASIC11.54□□□□□ -0.56
HIST1H1AQ02539 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.54□□□□□ -0.56
HIST1H1AQ02539 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms