Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
NKX2-5P52952 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
NKX2-5P52952 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.69□□□□□ -0.38
NKX2-5P52952 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC12.69□□□□□ -0.38
NKX2-5P52952 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX2-5P52952 FITM1-202ENST00000559294 800 ntBASIC12.69□□□□□ -0.38
NKX2-5P52952 AC011840.4-201ENST00000578471 627 ntBASIC12.69□□□□□ -0.38
NKX2-5P52952 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.69□□□□□ -0.38
NKX2-5P52952 AC233702.5-201ENST00000584107 538 ntBASIC12.69□□□□□ -0.38
NKX2-5P52952 SYDE1-203ENST00000600252 3832 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX2-5P52952 AL592071.1-201ENST00000611956 408 ntBASIC12.69□□□□□ -0.38
NKX2-5P52952 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 AP000867.4-201ENST00000641616 219 ntBASIC12.69□□□□□ -0.38
NKX2-5P52952 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NKX2-5P52952 PI4KAP2-201ENST00000360806 2080 ntBASIC12.69□□□□□ -0.38
NKX2-5P52952 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.69□□□□□ -0.38
NKX2-5P52952 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 RN7SL832P-201ENST00000607781 1756 ntBASIC12.69□□□□□ -0.38
NKX2-5P52952 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.69□□□□□ -0.38
NKX2-5P52952 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NKX2-5P52952 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NKX2-5P52952 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NKX2-5P52952 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 AL589702.1-201ENST00000641229 1509 ntBASIC12.68□□□□□ -0.38
NKX2-5P52952 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
NKX2-5P52952 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 AC012508.2-201ENST00000567613 1472 ntBASIC12.68□□□□□ -0.38
NKX2-5P52952 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX2-5P52952 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.68□□□□□ -0.38
NKX2-5P52952 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX2-5P52952 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.68□□□□□ -0.38
NKX2-5P52952 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.68□□□□□ -0.38
NKX2-5P52952 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.68□□□□□ -0.38
NKX2-5P52952 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 EGLN1P1-201ENST00000531623 762 ntBASIC12.68□□□□□ -0.38
NKX2-5P52952 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 AC091076.1-201ENST00000610741 619 ntBASIC12.68□□□□□ -0.38
NKX2-5P52952 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NKX2-5P52952 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NKX2-5P52952 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms