Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 AC079178.1-201ENST00000420915 656 ntBASIC14.41□□□□□ -0.1
RAB28P51157 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
RAB28P51157 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 MIR4741-201ENST00000579822 90 ntBASIC14.41□□□□□ -0.1
RAB28P51157 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.41□□□□□ -0.1
RAB28P51157 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.41□□□□□ -0.1
RAB28P51157 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RAB28P51157 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.41□□□□□ -0.1
RAB28P51157 AL023775.1-201ENST00000454907 1746 ntBASIC14.41□□□□□ -0.1
RAB28P51157 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RAB28P51157 MRPL37P1-201ENST00000592451 1337 ntBASIC14.41□□□□□ -0.1
RAB28P51157 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RAB28P51157 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB28P51157 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
RAB28P51157 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 AL136172.1-201ENST00000598590 1394 ntBASIC14.4□□□□□ -0.1
RAB28P51157 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB28P51157 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 HIST2H2BB-201ENST00000449108 381 ntBASIC14.4□□□□□ -0.1
RAB28P51157 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC14.4□□□□□ -0.1
RAB28P51157 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.4□□□□□ -0.1
RAB28P51157 AL358472.3-201ENST00000608147 415 ntBASIC14.4□□□□□ -0.1
RAB28P51157 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.4□□□□□ -0.1
RAB28P51157 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RAB28P51157 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.4□□□□□ -0.1
RAB28P51157 AC023824.1-201ENST00000562945 2975 ntBASIC14.4□□□□□ -0.1
RAB28P51157 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
RAB28P51157 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.39□□□□□ -0.11
RAB28P51157 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RAB28P51157 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RAB28P51157 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAB28P51157 Z93015.1-201ENST00000451718 390 ntBASIC14.39□□□□□ -0.11
RAB28P51157 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RAB28P51157 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.39□□□□□ -0.11
RAB28P51157 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms