Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SLC1A3P43003 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC1A3P43003 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SLC1A3P43003 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SLC1A3P43003 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SLC1A3P43003 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A3P43003 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A3P43003 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
SLC1A3P43003 AC022616.1-201ENST00000518688 554 ntBASIC13.8□□□□□ -0.2
SLC1A3P43003 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A3P43003 AP001063.1-201ENST00000568332 529 ntBASIC13.8□□□□□ -0.2
SLC1A3P43003 AC138761.1-201ENST00000584393 385 ntBASIC13.8□□□□□ -0.2
SLC1A3P43003 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 WFDC1-204ENST00000613603 549 ntBASIC13.8□□□□□ -0.2
SLC1A3P43003 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A3P43003 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.8□□□□□ -0.2
SLC1A3P43003 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.8□□□□□ -0.2
SLC1A3P43003 AC005252.2-201ENST00000624630 1141 ntBASIC13.8□□□□□ -0.2
SLC1A3P43003 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SLC1A3P43003 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
SLC1A3P43003 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.8□□□□□ -0.2
SLC1A3P43003 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLC1A3P43003 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SLC1A3P43003 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 RNU1-114P-201ENST00000365297 166 ntBASIC13.79□□□□□ -0.2
SLC1A3P43003 KLF2P2-201ENST00000416807 1039 ntBASIC13.79□□□□□ -0.2
SLC1A3P43003 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLC1A3P43003 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.79□□□□□ -0.2
SLC1A3P43003 DUX4L47-201ENST00000566374 394 ntBASIC13.79□□□□□ -0.2
SLC1A3P43003 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.79□□□□□ -0.2
SLC1A3P43003 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 CU634019.7-201ENST00000624153 1185 ntBASIC13.79□□□□□ -0.2
SLC1A3P43003 FP236241.2-201ENST00000624906 1185 ntBASIC13.79□□□□□ -0.2
SLC1A3P43003 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SLC1A3P43003 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SLC1A3P43003 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms